• AC-ROS: Assurance Case Driven Adaptation for the Robot Operating System
  Betty H. C. Cheng, Michael Langford, Robert Clark, Jonathon Fleck, and Philip K. McKinley
  In Proceedings of the 23rd International Conference on Model Driven Engineering Languages and Systems (MODELS), Montreal, Quebec, Canada, October 2020.
  



• Localization Uncertainty-driven Adaptive Framework for Controlling Ground Vehicle Robots
  Daniel Kent, Philip K. McKinley, and Hayder Radha
  In Proceedings of the International Conference on Intelligent Robots and Systems (IROS), Las Vegas, Nevada, October 2020.
  



• MAPE-K/MAPE-SAC: An interaction framework for adaptive systems with security assurance cases
  S. Jahan, I. Riley, C. Walter, Rose F. Gamble, Matt Pasco, P. K. McKinley, and B. H.C. Cheng
  Future Generation Computer Systems, 109:197--209, 2020.
  



• Assuring Vehicle Update Integrity using Asymmetric Public Key Infrastructure (PKI) and Public Key Cryptography (PKC)
  Daniel Kent, Betty H. C. Cheng, and Joshua Siegel
  SAE International Journal of Transportation Cybersecurity and Privacy, 2020. (2020 escar USA Special Issue)
  



• Protecting Temporal Fingerprints with Synchronized Chaotic Circuits
  Fengyi Tang and Betty H. C. Cheng
  In 53rd Hawaii International Conference on System Sciences, HICSS 2020, Maui, Hawaii, USA, January 7-10, 2020, pages 1--10, 2020.
  



• Applying Evolution and Novelty Search to Enhance the Resilience of Autonomous Systems
  Michael A. Langford, Glen A. Simon, Philip K. McKinley, and Betty H. C. Cheng
  In Proceedings of the 14th IEEE International Symposium on Software Engineering for Adaptive and Self-Managing Systems (SEAMS), Montreal, Quebec, Canada, May 2019.
  



• Enhancing Learning-Enabled Software Systems to Address Environmental Uncertainty
  Michael A. Langford and Betty H. C. Cheng
  In Proceedings of the 16th IEEE International Conference on Autonomic Computing, Umeå, Sweden, 2019.
  



• MAPE-SAC: A Framework to Dynamically Manage Security Assurance Cases
  Sharmin Jahan, Matthew Pasco, Rose Gamble, Philip McKinley, and Betty H. C. Cheng
  In Proceedings of the 2019 Workshop on Self-Protecting Systems, Umeå, Sweden, pages 146--151, 2019.
  



• Exploring Bipedal Hopping through Computational Evolution
  J. M. Moore, C. L. Shine, C. P. McGowan, and P. K. McKinley
  Artificial Life, 25(3):236--249, 2019.
  



• Evo-ROS: Integrating Evolution and the Robot Operating System
  Glen A. Simon, Anthony J. Clark, Jared M. Moore, and Philip K. McKinley
  In Proceedings of the Genetic and Evolutionary Computation Conference Companion (Workshop on Evolutionary Computation Software Systems), Kyoto, Japan, pages 1386--1393, July 2018.
  



• Effect of animat complexity on the evolution of hierarchical control
  Jared M. Moore, Anthony J. Clark, and Philip K. McKinley
  In Proceedings of the Genetic and Evolutionary Computation Conference, Berlin, Germany, pages 147--154, July 2017.
  



• Resource Abundance and the Critical Transition to Cooperation
  Brian D. Connelly, Eric L. Bruger, Philip K. McKinley, and Christopher M. Waters
  Journal of Evolutionary Biology, 30(4):750-–761, 2017.
  



• Evolution of Joint-Level Control for Quadrupedal Locomotion
  J. M. Moore and Philip K. McKinley
  Artificial Life, 23(1):58--79, 2016.
  



• An Evolutionary Approach to Discovering Execution Mode Boundaries for Adaptive Controllers
  Anthony J. Clark, Byron DeVries, Jared M. Moore, Betty H. C. Cheng, and Philip K. McKinley
  In Proceedings of the IEEE Symposium Series on Computational Intelligence (SSCI), Athens, Greece, pages 1--8, December 2016.
  



• A Comparison of Multiobjective Algorithms in Evolving Quadrupedal Gaits
  J. M. Moore and Philip K. McKinley
  In Proceedings of the 14th International Conference on the Simulation of Adaptive Behavior (SAB), pages 157-169, August 2016.
  



• Evolutionary Multiobjective Design of a Flexible Caudal Fin for Robotic Fish
  Anthony J. Clark, Xiaobo Tan, and Philip K. McKinley
  Bioinspiration & Biomimetics, special issue on Bioinspired Soft Robotics, 10(6), November 2015.
  



• Evaluating the Effect of a Flexible Spine on the Evolution of Quadrupedal Gait
  J. M. Moore, P. K. McKinley, and C. P. McGowan
  In Proceedings of the 13th European Conference on Artificial Life, pages 166--173, July 2015.
  



• Enhancing a Model-Free Adaptive Controller through Evolutionary Computation
  Anthony J. Clark, Philip K. McKinley, and Xiaobo Tan
  In Proceedings of the 2015 ACM Genetic and Evolutionary Computation Conference, pages 137--144, July 2015.
  



• Balancing Performance and Efficiency in a Robotic Fish with Evolutionary Multiobjective Optimization
  Anthony J. Clark, Jianxun Wang, Xiaobo Tan, and Philip K. McKinley
  In Proceedings of the IEEE International Conference on Evolvable Systems, held in conjunction with the 2014 IEEE Symposium on Computational Intelligence (SSCI), Orlando, Florida, December 2014.
  



• Dynamic Modeling of Robotic Fish with a Base-actuated Flexible Tail
  Jianxun Wang, Philip K. McKinley, and Xiaobo Tan
  Journal of Dynamic Systems, Measurement and Control, 137(1), August 2014.
  



• On-Board Evolution of a Model-Free Adaptive Controller for a Robotic Fish
  Anthony Clark, Philip K. McKinley, and Xiaobo Tan
  In Proceedings of Evolution of Physical Systems Workshop, held in conjunction with the 14th International Conference on the Synthesis and Simulation of Living Systems (ALIFE 14), New York, New York, July 2014.
  



• Hold the Spot: Evolution of Generalized Station Keeping for an Aquatic Robot
  Jared M. Moore and Anthony J. Clark
  In Proceedings of the 14th International Conference on the Synthesis and Simulation of Living Systems (ALIFE 14), New York, New York, pages 200--201, July 2014.
  



• Evolutionary Robotics on the Web with WebGL and Javascript
  Jared M. Moore, Anthony J. Clark, and Philip K. McKinley
  In Proceedings of the Workshop on Artificial Life and the Web 2014, held in conjunction with the 14th International Conference on the Synthesis and Simulation of Living Systems (ALIFE 14), New York, New York, July 2014.
  



• Investigating Modular Coupling of Morphology and Control with Digital Muscles
  Jared M. Moore and Philip K. McKinley
  In Proceedings of the 14th International Conference on the Synthesis and Simulation of Living Systems (ALIFE 14), New York, New York, pages 148--155, July 2014.
  



• Evolving Joint-Level Control with Digital Muscles
  Jared M. Moore and Philip K. McKinley
  In Proceedings of the 2014 ACM Genetic and Evolutionary Computing Conference, Vancouver, British Columbia, Canada, pages 209--216, 2014.
  



• Just Keep Swimming: Accounting for Uncertainty in Self-Modeling Aquatic Robots
  Matthew J. Rose, Anthony J. Clark, Jared M. Moore, and Philip K. McKinley
  In Proceedings of the 6th International Workshop on Evolutionary and Reinforcement Learning for Autonomous Robot Systems, Taormina, Italy, September 2013. (Best Paper Award)
  



• Exploring the Role of the Tail in Bipedal Hopping through Computational Evolution
  Jared M. Moore, Anne K. Gutmann, Craig P. McGowan, and Philip K. McKinley
  In Proceedings of the 12th European Conference on Artificial Life (ECAL), Taormina, Italy, pages 11--18, September 2013.
  



• Evolution of Station Keeping as a Response to Flows in an Aquatic Robot
  Jared M. Moore, Anthony J. Clark, and Philip K. McKinley
  In Proceedings of the 2013 ACM Genetic and Evolutionary Computing Conference, Amsterdam, The Netherlands, pages 239--246, 2013.
  



• Evolutionary Optimization of Robotic Fish Control and Morphology (poster summary)
  Anthony J. Clark and Philip K. McKinley
  In Proceedings of the 2013 ACM Genetic and Evolutionary Computing Conference Companion, Amsterdam, The Netherlands, pages 21--22, 2013.
  



• Evolution of an Amphibious Robot with Passive Joints
  Jared M. Moore and Philip K. McKinley
  In Proceedings of the 2013 IEEE Congress on Evolutionary Computation, Cancun, Mexico, pages 1443--1450, 2013.
  



• Harnessing Evolutionary Computation to Enable Dynamically Adaptive Systems to Manage Uncertainty
  Betty H. C. Cheng, Andres J. Ramirez, and Philip K. McKinley
  In Proceedings of the First International Workshop on Combining Modelling and Search-Based Software Engineering (CMSBSE), San Francisco, California, USA, May 2013.
  



• Genetic Variation and the Evolution of Consensus in Digital Organisms
  David B. Knoester, Heather J. Goldsby, and Philip K. McKinley
  IEEE Transactions on Evolutionary Computation, 17(3):403--417, 2013.
  



• Dynamic Modeling of Robotic Fish with a Flexible Caudal Fin
  J. Wang, P. K. McKinley, and X. Tan
  In Proceedings of the ASME 2012 5th Annual Dynamic Systems and Control Conference, joint with the JSME 2012 11th Motion and Vibration Conference, Ft. Lauderdale, Florida, USA, October 2012. (Paper DSCC2012-MOVIC2012-8695)
  



• Constructing Communication Networks with Evolved Digital Organisms
  David B. Knoester and Philip K. McKinley
  In Proceedings of the Sixth IEEE International Conference on Self-Adaptive and Self-Organizing Systems, Lyon, France, pages 139--138, September 2012.
  



• Evolutionary design and experimental validation of a flexible caudal fin for robotic fish
  Anthony Clark, Jared Moore, Jianxun Wang, Xiaobo Tan, and Philip McKinley
  In Proceedings of the Thirteenth International Conference on the Synthesis and Simulation of Living Systems, East Lansing, Michigan, USA, pages 325--332, July 2012. (Best Paper Award)
  



• Evolving Flexible Joint Morphologies
  Jared M. Moore and Philip K. McKinley
  In Proceedings of the ACM Genetic and Evolutionary Computation Conference (GECCO-2012), Philadelphia, Pennsylvania, pages 145--152, July 2012.
  



• Exploring the Evolution of Internal Control Structure using Digital Enzymes (Poster Summary)
  C. Byers, B. H. C. Cheng, and P. K. McKinley
  In Proceedings of the ACM Genetic and Evolutionary Computation Conference (GECCO-2012), Philadelphia, Pennsylvania, pages 1407--1408, July 2012.
  



• The SEEDS Platform for Evolutionary and Ecological Simulations
  Brian D. Connelly, Luis Zaman, and Philip K. McKinley
  In Proceedings of the Evolutionary Computation Software Systems Workshop, published in the GECCO Companion, Philadelphia, Pennsylvania, pages 133--140, July 2012.
  



• Evolution of Resistance to Quorum Quenching in Digital Organisms
  B. E. Beckmann, David B. Knoester, B. D. Connelly, C. M. Waters, and Philip K. McKinley
  Artificial Life, 18(3):291--310, 2012.
  



• A Taxonomy of Uncertainty for Dynamically Adaptive Systems
  Andres J. Ramirez and Betty H. C. Cheng
  In Proceedings of the International Symposium on Software Engineering for Adaptive and Self-Managed Systems (SEAMS), Zurich, Switzerland, pages 99--108, June 2012.
  



• Applying Evolutionary Computation To Mitigate Uncertainty in Dynamically Adaptive, High-Assurance Middleware
  P. K. McKinley, B. H. C. Cheng, A. J. Ramirez, and A. C. Jensen
  Journal of Internet Services and Applications, Special Issue on The Future of Middleware, 3(1):51--58, 2012.
  



• Automatically RELAXing a goal model to cope with uncertainty
  Andres J. Ramirez, Erik M. Fredericks, Adam C. Jensen, and Betty H. C. Cheng
  In Proceedings of the 4th International Conference on Search Based Software Engineering, pages 198--212, 2012.
  



• Relaxing claims: coping with uncertainty while evaluating assumptions at run time
  Andres J. Ramirez, Betty H. C. Cheng, Nelly Bencomo, and Pete Sawyer
  In Proceedings of the 15th International Conference on Model Driven Engineering Languages and Systems, pages 53--69, 2012.
  



• Automatically Exploring How Uncertainty Impacts the Behavior of Dynamically Adaptive Systems
  Andres J. Ramirez, Adam C. Jensen, Betty H. C. Cheng, and David B. Knoester
  In Proceedings of the 26th International Conference on Automated Software Engineering, Lawrence, Kansas, pages 568--571, November 2011.
  



• Neuroevolution of Controllers for Self-Organizing Mobile Ad Hoc Networks
  David B. Knoester and Philip K. McKinley
  In Proceedings of the Fifth IEEE International Conference on Self-Adaptive and Self-Organizing Systems, Ann Arbor, Michigan, pages 188--197, October 2011.
  



• An Evolutionary Approach to Network Self-Organization and Resilient Data Diffusion
  Andres J. Ramirez, Betty H. C. Cheng, and Philip K. McKinley
  In Proceedings of the Fifth IEEE International Conference on Self-Adaptive and Self-Organizing Systems, Ann Arbor, Michigan, pages 198--207, October 2011.
  



• Automatic Derivation of Utility Functions for Monitoring Software Requirements
  Andres J. Ramirez and Betty H. C. Cheng
  In Proceedings of the ACM/IEEE International Conference on Model Driven Engineering Languages and Systems (MODELS 2011), Wellington, New Zealand, pages 501--516, October 2011.
  



• A Toolchain for the Detection of Structural and Behavioral Latent System Properties
  Adam Jensen, Betty H. C. Cheng, Heather J. Goldsby, and Edward Nelson
  In Proceedings of the ACM/IEEE International Conference on Model Driven Engineering Languages and Systems (MODELS 2011), Wellington, New Zealand, pages 683--698, October 2011. (Best Paper Nomination)
  



• A Toolchain for the Detection of Structural and Behavioral Latent System Properties
  Adam Jensen, Betty H. C. Cheng, Heather J. Goldsby, and Edward Nelson
  In Proceedings of the ACM/IEEE International Conference on Model Driven Engineering Languages and Systems (MODELS 2011), Wellington, New Zealand, pages 683--698, October 2011. (Best Paper Nomination)
  



• Digital Enzymes: Agents of Reaction Inside Robotic Controllers for the Foraging Problem
  Chad M. Byers, Betty H. C. Cheng, and Philip K. McKinley
  In Proceedings of the ACM Genetic and Evolutionary Computation Conference (GECCO-2011), Dublin, Ireland, pages 243--250, July 2011. (Best Paper Nomination)
  



• Modeling the Evolutionary Dynamics of Plasmids in Spatial Populations
  Brian D. Connelly, Luis Zaman, Philip K. McKinley, and Charles Ofria
  In Proceedings of the ACM Genetic and Evolutionary Computation Conference (GECCO-2011), Dublin, Ireland, pages 227--233, July 2011.
  



• Effects of Biased Group Selection on Cooperative Predation in Digital Organisms (poster summary)
  Daniel Couvertier and Philip K. McKinley
  In Proceedings of the ACM Genetic and Evolutionary Computation Conference (GECCO-2011), Dublin, Ireland, pages 23--24, July 2011.
  



• An Aspect-Oriented Approach for Implementing Evolutionary Computation Applications
  Andres J. Ramirez, Adam C. Jensen, and Betty H. C. Cheng
  In Proceedings of the 10th International Conference on Aspect-Oriented Software Development (AOSD-11), Porto de Galinhas, Pernambuco, Brazil, pages 153--164, March 2011.
  



• Transparent Shaping: A Methodology for Adding Adaptive Behavior to Existing Software Systems and Applications
  S. M. Sadjadi, P. K. McKinley, and B. H. C. Cheng
  In W. Eric Wong and Bojan Cukic, editors,Adaptive Control Approach for Software Quality Improvement, pages 77--114. World Scientific, 2011.
  



• On the Performance of Indirect Encoding Across the Continuum of Regularity
  J. Clune, K. O. Stanley, R. T. Pennock, and C. Ofria
  IEEE Transactions on Evolutionary Computation, 15(3):346--367, 2011.
  



• Selective pressures for accurate altruism targeting: evidence from digital evolution for difficult-to-test aspects of inclusive fitness theory
  Jeff Clune, Heather J. Goldsby, Charles Ofria, and Robert T. Pennock
  Proceedings of the Royal Society B, 278:666--674, 2011.
  



• Plato: A Genetic Algorithm Approach to Run-Time Reconfiguration in Autonomic Computing Systems
  Andres J. Ramirez, David B. Knoester, Betty H. C. Cheng, and Philip K. McKinley
  Cluster Computing, 14(3):229--244, 2011.
  



• Evolution of Synchronization and Desynchronization in Digital Organisms
  D. B. Knoester and Philip K. McKinley
  Artificial Life, 17(1):1--20, 2011.
  

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