• Resource Abundance Promotes the Evolution of Public Goods Cooperation
  B. D. Connelly, B. E. Beckmann, and P. K. McKinley
  In Proceedings of the ACM Genetic and Evolutionary Computation Conference (GECCO-2010), Portland, Oregon, pages 143--150, 2010. (Best Paper Award)
  



• Social Structure and the Maintenance of Biodiversity
  B. Connelly, L. Zaman, C. Ofria, and P. McKinley
  In Proceedings of the 12th International Conference on the Synthesis and Simulation of Living Systems (ALIFE XII), Odense, Denmark, pages 461--468, 2010.
  



• RELAX: A language to address uncertainty in self-adaptive systems requirement
  Jon Whittle, Pete Sawyer, Nelly Bencomo, Betty Cheng, and Jean-Michel Bruel
  Requirements Engineering, 15:177--196, 2010.
  



• Adaptive Monitoring of Software Requirements
  Andres J. Ramirez, Betty H. C. Cheng, and Philip K. McKinley
  In Proceedings of the First International Workshop on Requirements at Run Time, Sydney, Australia, pages 41--50, October 2010.
  



• Evolutionary dynamics, epistatic interactions, and biological information
  C. C. Strelioff, C. Ofria, and R. E. Lenski
  Journal of Theoretical Biology, 266:584--594, 2010.
  



• Automatically Discovering Properties that Specify the Latent Behavior of UML Models
  Heather J. Goldsby and Betty H. C. Cheng
  In Proceedings of the ACM/IEEE International Conference on Model Driven Engineering Languages and Systems (MoDELS 2010), Oslo, Norway, pages 316--330, October 2010.
  



• On the Use of Genetic Programming for Automated Refactoring and the Introduction of Design Patterns
  A. C. Jensen and B. H. C. Cheng
  In Proceedings of the ACM Genetic and Evolutionary Computation Conference (GECCO-2010), Portland, Oregon, pages 1341--1348, July 2010.
  



• Neuroevolution of Mobile Ad Hoc Networks
  D. B. Knoester, H. J. Goldsby, and P. K. McKinley
  In Proceedings of the ACM Genetic and Evolutionary Computation Conference (GECCO-2010), Portland, Oregon, pages 603--610, July 2010.
  



• Investigating Whether HyperNEAT Produces Modular Neural Networks
  J. Clune, B. E. Beckmann, P. K. McKinley, and C. Ofria
  In Proceedings of the ACM Genetic and Evolutionary Computation Conference (GECCO-2010), Portland, Oregon, pages 235--642, July 2010.
  



• Evolution of Division of Labor in Genetically Homogenous Groups
  H. J. Goldsby, D. B. Knoester, and C. Ofria
  In Proceedings of the ACM Genetic and Evolutionary Computation Conference (GECCO-2010), Portland, Oregon, pages 135--142, July 2010.
  



• Automatically Generating Adaptive Logic to Balance Non-functional Tradeoffs During Reconfiguration
  Andres J. Ramirez, Betty H. C. Cheng, Philip K. McKinley, and Benjamin E. Beckmann
  In Proceedings of the 7th International Conference on Autonomic Computing, Washington, DC, pages 225--234, June 2010.
  



• Design Patterns for Developing Dynamically Adaptive Systems
  Andres J. Ramirez and Betty H. C. Cheng
  In Proceedings of the Workshop on Software Engineering for Adaptive and Self-Managed Systems (SEAMS), Capetown, South Africa, pages 49--58, May 2010.
  



• Automatically Discovering Properties That Specify the Latent Behavior of UML Models
  Heather Goldsby and Betty H. C. Cheng
  In Proceedings of the ACM/IEEE International Conference on Model Driven Engineering Languages and Systems (MODELS 2010), Capetown, South Africa, pages 316--330, May 2010.
  



• A Goal-Based Modeling Approach to Develop Requirements of an Adaptive System with Environmental Uncertainty
  Betty H. C. Cheng, Pete Sawyer, Nelly Bencomo, and Jon Whittle
  In Proceedings of the ACM/IEEE 12th International Conference on Model Driven Engineering Languages and Systems (MoDELS), Denver, Colorado, pages 468--483, October 2009.
  



• Evolving Virtual Fireflies
  David B. Knoester and Philip K. McKinley
  In Proceedings of the 10th European Conference on Artificial Life, Budapest, Hungary, pages 474--481, September 2009.
  



• Analytical Modeling and Experimental Studies of Robotic Fish Turning
  X. Tan, M. Carpenter, J. Thon, and F. Alequin-Ramos
  In Proceedings of the 2010 IEEE International Conference on Robotics and Automation, Anchorage, Alaska, pages 102--108, 2010.
  



• Ensemble extraction for classification and detection of bird species
  E. P. Kasten, P. K. McKinley, and S. H. Gage
  Ecological Informatics, 5:153--166, 2010.
  



• Evolving Social Behavior in Adverse Environments
  Brian D. Connelly and Philip K. McKinley
  In Proceedings of the 10th European Conference on Artificial Life, Budapest, Hungary, pages 490--498, September 2009.
  



• HybrID: A Hybridization of Indirect and Direct Encodings for Evolutionary Computation
  Jeff Clune, Benjamin E. Beckmann, Charles Ofria, and Robert T. Pennock
  In Proceedings of the 10th European Conference on Artificial Life, Budapest, Hungary, September 2009.
  



• The Evolution of Division of Labor
  Heather Goldsby, David B. Knoester, Jeff Clune, Philip K. McKinley, and Charles Ofria
  In Proceedings of the 10th European Conference on Artificial Life, Budapest, Hungary, pages 10--18, September 2009.
  



• Evolution of Probabilistic Consensus in Digital Organisms
  David B. Knoester and Philip K. McKinley
  In Proceedings of the Third IEEE International Conference on Self-Adaptive and Self-Organizing Systems, San Francisco, California, pages 223--232, September 2009.
  



• Effects of Communication Impairments on Quorum Sensing (poster summary)
  Benjamin E. Beckmann, David B. Knoester, and Philip K. McKinley
  In Proceedings of the Third IEEE International Conference on Self-Adaptive and Self-Organizing Systems, San Francisco, California, pages 276--277, September 2009.
  



• RELAX: Incorporating Uncertainty into the Specification of Self-Adaptive Systems
  Jon Whittle, Pete Sawyer, Nelly Bencomo, Betty H. C. Cheng, and Jean-Michel Bruel
  In Proceedings of the 17th IEEE International Requirements Engineering Conference, Atlanta, Georgia, September 2009.
  



• Evolving Quorum Sensing in Digital Organisms
  Benjamin E. Beckmann and Philip K. McKinley
  In Proceedings of the ACM Genetic and Evolutionary Computation Conference (GECCO-2009), Montreal, Canada, pages 97--104, July 2009.
  



• Evolution of Robust Data Distribution Among Digital Organisms
  David B. Knoester, Andres Ramirez, Philip K. McKinley, and Betty H. C. Cheng
  In Proceedings of the ACM Genetic and Evolutionary Computation Conference (GECCO-2009), Montreal, Canada, pages 137--144, July 2009. (Best Paper Nomination)
  



• Transparent autonomization of CORBA
  S. M. Sadjadi and P. K. McKinley
  Computer Networks, 53(10):1570--1586, July 2009.
  



• Applying Genetic Algorithms to Decision Making in Autonomic Computing Systems
  Andres Ramirez, David Knoester, Betty H. C. Cheng, and Philip K. McKinley
  In Proceedings of the 6th IEEE International Conference on Autonomic Computing and Communications, Barcelona, Spain, pages 97--106, June 2009. (Best Paper Award)
  



• Design Patterns for Developing Dynamically Adaptive Systems (poster summary)
  Andres Ramirez and Betty H. C. Cheng
  In Proceedings of the 6th IEEE International Conference on Autonomic Computing and Communications, Barcelona, Spain, June 2009.
  



• Evolving Coordinated Quadruped Gaits with the HyperNEAT Generative Encoding
  Jeff Clune, Benjamin E. Beckmann, Charles Ofria, and Robert T. Pennock
  In Proceedings of the 2009 IEEE Congress on Evolutionary Computation (CEC), Trondheim, Norway, May 2009.
  



• Modular Verification of Dynamically Adaptive Systems
  Ji Zhang, Heather J. Goldsby, and Betty H. C. Cheng
  In Proceedings of the ACM International Conference on Aspect-Oriented Software Development (AOSD 2009), Charlottesville, Virginia, March 2009.
  



• Digital Evolution of Quorum Sensing and its Applications
  Benjamin E. Beckmann and Philip K. McKinley
  In Proceedings of the Complex Systems Advanced Academic Workshop, Ann Arbor, Michigan, May 2009.
  



• Applying Digital Evolution to the Design of Self-Adaptive Software
  Benjamin Beckmann, Laura Grabowski, Philip McKinley, and Charles Ofria
  In Proceedings of the 2009 IEEE Symposium on Artificial Life, Nashville, Tennessee, pages 100--107, March 2009.
  



• Evolving Cooperative Pheromone Usage in Digital Organisms
  Brian D. Connelly, Philip K. McKinley, and Benjamin E. Beckmann
  In Proceedings of the 2009 IEEE Symposium on Artificial Life, Nashville, Tennessee, pages 184--191, March 2009.
  



• Research Directions in Requirements Engineering
  Betty H. C. Cheng and Joanne M. Atlee
  In K.J. Lyytinen, P. Loucopoulos, J. Mylopoulos, and W. Robinson, editors,Design Requirements Engineering: A Ten-Year Perspective, pages 11--43. Springer, 2009.
  



• Automatically Generating Behavioral Models of Adaptive Systems to Address Uncertainty
  Heather Goldsby and Betty H. C. Cheng
  In Proceedings of the ACM/IEEE 12th International Conference on Model Driven Engineering Languages and Systems (MoDELS), pages 568--583, October 2008. (Selected as one of the Best Papers)
  



• Evolution of Adaptive Population Control in Multi-agent Systems
  Benjamin E. Beckmann and Philip K. McKinley
  In Proceedings of the Second IEEE International Conference on Self-Adaptive and Self-Organizing Systems (SASO), Venice, Italy, pages 181--190, October 2008.
  



• Dynamis: Dynamic Overlay Service Composition for Distributed Stream Processing
  Farshad A. Samimi and Philip K. McKinley
  In Proceedings of the 20th International Conference on Software Engineering and Knowledge Engineering, San Fransisco, California, pages 881--886, July 2008.
  



• Cooperative Network Construction using Digital Germlines
  David B. Knoester, Philip K. McKinley, and Charles A. Ofria
  In Proceedings of the ACM Genetic and Evolutionary Computation Conference (GECCO-2008), Atlanta, Georgia, pages 217--224, July 2008.
  



• Selection for Group-Level Efficiency Leads to Self-Regulation of Population Size
  Benjamin E. Beckmann, Philip K. McKinley, and Charles Ofria
  In Proceedings of the ACM Genetic and Evolutionary Computation Conference (GECCO-2008), Atlanta, Georgia, July 2008.
  



• Avida-MDE: A Digital Evolution Approach to Generating Models of Adaptive System Behavior
  Heather Goldsby and Betty H. C. Cheng
  In Proceedings of the ACM Genetic and Evolutionary Computation Conference (GECCO-2008), Atlanta, Georgia, July 2008.
  



• Autonomic software development methodology based on Darwinian evolution (poster summary)
  Benjamin E. Beckmann, Laura M. Grabowski, Philip K. McKinley, and Charles Ofria
  In Proceedings of the 5th IEEE International Conference on Autonomic Computing, Chicago, Illinois, June 2008.
  



• Digital Evolution of Behavioral Models for Autonomic Systems
  Heather J. Goldsby, Betty H. C. Cheng, Philip K. McKinley , David B. Knoester, and Charles Ofria
  In Proceedings of the 5th IEEE International Conference on Autonomic Computing, Chicago, Illinois, pages 87--96, June 2008. (Best Paper Award)
  



• Goal-Based Modeling of Dynamically Adaptive System Requirements
  Heather J. Goldsby, Pete Sawyer, Nelly Bencomo, Betty H. C. Cheng , and Danny Hughes
  In Proceedings of the 15th IEEE International Conference on Engineering of Computer-Based Systems (ECBS 2008), Belfast, Northern Ireland, March 2008.
  



• Harnessing Digital Evolution
  Philip K. McKinley, Betty H. C. Cheng, Charles Ofria, David Knoester, Benjamin Beckmann, and Heather Goldsby
  IEEE Computer, 41(1), January 2008.
  



• Service Clouds: Distributed Infrastructure for Adaptive Communication Services
  F. A. Samimi, P. K. McKinley, S. M. Sadjadi, C. Tang, J. K. Shapiro, and Z. Zhou
  IEEE Transactions on Network and Service Management, 4(2):84--95, 2007.
  



• Evolution of Adaptive Sleep Response in Digital Organisms
  Benjamin Beckmann, Philip K. McKinley, and Charles A. Ofria
  In Proceedings of the 9th European Conference on Artificial Life, Lisbon, Portugal, September 2007.
  



• Directed Evolution of Communication and Cooperation in Digital Organisms
  David B. Knoester, Philip K. McKinley, Benjamin Beckmann, and Charles A. Ofria
  In Proceedings of the 9th European Conference on Artificial Life, Lisbon, Portugal, September 2007.
  



• Using Group Selection to Evolve Leadership in Populations of Self-Replicating Digital Organisms
  David B. Knoester, Philip K. McKinley, and Charles Ofria
  In Proceedings of the ACM Genetic and Evolutionary Computation Conference (GECCO-2007), London, UK, July 2007.
  



• Evolution of Cooperative Information Gathering in Self-Replicating Digital Organisms
  Benjamin Beckmann, Philip K. McKinley, David B. Knoester, and Charles Ofria
  In Proceedings of the First IEEE International Conference on Self-Adaptive and Self-Organizing Systems (SASO), Boston, Massachusetts, July 2007.
  



• Automated Ensemble Extraction and Analysis of Acoustic Data Streams
  Eric P. Kasten, Philip K. McKinley, and Stuart H. Gage
  In Proceedings of the First International Workshop on Distributed Event Processing, Systems and Applications (DEPSA), in conjunction with ICDCS 2007, Toronto, Ontario, Canada, pages 66, June 2007.
  



• Digitally Evolving Models for Dynamically Adaptive Systems
  H. J. Goldsby, D. B. Knoester, B. H. C. Cheng, P. K. McKinley, and C. A. Ofria
  In Proceedings of the ICSE Workshop on Software Engineering for Adaptive and Self-Managing Systems (SEAMS), Minneapolis, Minnesota, May 2007.
  



• Applying Digital Evolution to the Design of Self-Adaptive ULS Systems (Position Paper)
  P. K. McKinley, B. H. C. Cheng, and C. A. Ofria
  In Proceedings of the ICSE Workshop on Software Technologies for Ultra-Large-Scale (ULS) Systems, Minneapolis, Minnesota, May 2007.
  



• Topology-aware overlay path probing
  Chiping Tang and Philip K. McKinley
  Computer Communications, 30(9):1994--2009, 2007.
  



• MESO: Supporting Online Decision Making in Autonomic Computing Systems
  Eric P. Kasten and Philip K. McKinley
  IEEE Transactions on Knowledge and Data Engineering, 19(4):485--499, April 2007.
  



• Specifying Real-Time Properties in Autonomic Systems
  J. Zhang, Z. Zhou, B. H. C. Cheng, and P. K. McKinley
  Innovations in Systems and Software Engineering, 3(1):3--16, March 2007.
  

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